chr11:67586935:C>A Detail (hg38)

Information

Genome

Assembly Position
hg19 chr11:67,354,406-67,354,406 View the variant detail on this assembly version.
hg38 chr11:67,586,935-67,586,935

HGVS

[No Data.]
Summary

MGeND

Clinical significance
Variant entry
GWAS entry
Disease area statistics Show details

Frequency

JP HGVD:[No Data.]
ToMMo:0.134
NCBN:[No Data.]
NCBN(Hondo):[No Data.]
NCBN(Ryukyu):[No Data.]
East asia ExAC:[No Data.]

Prediction

ClinVar

Clinical Significance
Review star [No Data.]
Show details
Links
Disease area statistics
[No Data.]
MGeND
[No Data.]
ClinVar
[No Data.]
CIViC
[No Data.]
DisGeNET
Score Disease name Description Source Pubmed Links
0.224 asthma Chromosome 11 haplotype CTACGAGGCC (corresponding to MS4A2 rs574700, rs1441586, ... BeFree 21320344 Detail
0.055 asthma Chromosome 11 haplotype CTACGAGGCC (corresponding to MS4A2 rs574700, rs1441586, ... BeFree 21320344 Detail
Annotation

Annotations

DescrptionSourceLinks
Chromosome 11 haplotype CTACGAGGCC (corresponding to MS4A2 rs574700, rs1441586, rs556917, rs502581, ... DisGeNET Detail
Chromosome 11 haplotype CTACGAGGCC (corresponding to MS4A2 rs574700, rs1441586, rs556917, rs502581, ... DisGeNET Detail
Gene
-
dbSNP
rs947895 dbSNP
Genome
hg38
Position
chr11:67,586,935-67,586,935
Variant Type
snv
Reference Allele
C
Alternative Allele
A
ToMMo VCF FILTER column value (ToMMo 8.3KJPN Allele Frequency Panel(v20200831))
PASS
Total VCF ID column value (ToMMo 8.3KJPN Allele Frequency Panel(v20200831))
rs947895
Allele frequency, for each ALT allele (ToMMo 8.3KJPN Allele Frequency Panel(v20200831))
0.134
Allele count in genotypes, for each ALT allele (ToMMo 8.3KJPN Allele Frequency Panel(v20200831))
2246
Total number of alleles in called genotypes (ToMMo 8.3KJPN Allele Frequency Panel(v20200831))
16758
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